Monday, September 26, 2011

Bioconductor Nextgen sequence library

Date: Oct 4, 2011.
Topic: Next Gen sequencing data processing using R and bioconductor
Presenter: Shan Gao (Fei lab, BTI)
Slides:

Bioconductor has a newer library called flowCore with code handling next generation sequencing data:
http://bioconductor.org/help/workflows/high-throughput-assays/

Sample code shown in the presentation (and some sample files) will be available soon.

Nice manual:
http://manuals.bioinformatics.ucr.edu/home/ht-seq